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but don't talk about what u don't know,
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Ok, i don't doubt that u do know something about this subject,
Eeprom is an Electronically erasable programmable read onlyl memory
A surge or voltage spike to the eeprom itself can erase some of the blocks within it which would obviously corrupt it. this usually happens during in thunderstorms (on some TV stuff when there is a desugn fault and the 5v supply is not correctly smoothed) .
Maybe you had a staic problem or a severe internal voltage fluctuation that just occurred at the time you doing something with the box and the natural assumption is it was because you were FTPing stuff on and off the HDD its sometimes impossible to trace the exact electrical throughput to the chip that causes corruption but definetely removing any files or replacing does not write to chip.
Can you imagine how many corrupt eeproms would be about if changing contents of the HDD corrupted the Eeprom. Imagine the times during even gameplay when the hDD is accessed and files cached to it. Let alone people changing dashboards and putting games on and off.
Edit
i just noticed you said
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I've seen eeproms get corrupted by just doing stuff via ftp (deleting and adding) and sometimes it can be a GREEN FLASHING LED
then
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.I assure u all i did was boot, ftp in, delete the uix.xbe and the uix folder on C, reboot, red flashing eeprom
You don't seem to be too sure on your facts here. was it defo a corrupt eeprom you had or are you covering what you said