either:
-r64 output.bin
or
-r256 output.bin 0 0fff
will grab just the system file area as well as the reserved area. bad blocks up in the "memunit" area are just skipped, so there's really no value in dumping anything about 64mb+reserved.
that said:
you've got a messload of mismatches. 250's should be marked as 0's and as a result you shouldn't have an issue with mismatches with those blocks. if you don't have consistent reads across multiple system file area reads, don't move forward. check your soldering.
tldr, just:
CODE
nandpro usb: -r64 nand1.bin
nandpro usb: -r64 nand2.bin
fc /b nand1.bin nand2.bin